Type
of sequence.
A:
Complete sequence previously unavailable for the virus species.
Complete sequence characterisation.
B:
Complete sequence previously available for the virus species. New
complete sequence of an isolate of interest.
C:
Complete sequence previously unavailable for the virus species.
Partial sequence characterisation.
D:
Complete sequence previously available for the virus species. Partial
sequence of an isolate of interest.
|
Partner
|
NA
|
Family
|
Genus
|
Virus
|
Type
of
sequence
|
Backup
Viruses
|
|
P3
|
ssRNA+
|
Arteriviridae
|
Arterivirus
|
Equine
Arteritis (Bucyrus)
|
D
|
Other
isolate
|
|
P3
|
ssRNA+
|
Arteriviridae
|
Arterivirus
|
Porcine
Reproductive and Respiratory
Syndrome
Virus (USA)
|
D
|
European
isolate
|
|
P3
|
ssRNA+
|
Arteriviridae
|
Arterivirus
|
Lactate
Dehydrogenase-elevating
Virus
|
D
|
_
|
|
P3
|
ssRNA+
|
Arteriviridae
|
Arterivirus
|
Simian
Hemorrhagic Fever Virus
|
D
|
_
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Coronavirus
|
Human
Coronavirus 229E
|
D
|
Porcine
Epidemic Diarrhea Virus
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Coronavirus
|
Feline
Infectious Peritonitis Virus
|
C
|
_
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Coronavirus
|
Transmissible
gastroenteritis Virus
|
D
|
_
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Coronavirus
|
Human
Coronavirus OC43
|
C
|
_
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Coronavirus
|
Rabbit
Coronavirus
|
A
|
_
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Coronavirus
|
Mouse
Hepatitis Virus
|
D
|
_
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Coronavirus
|
Infectious
Bronchitis Virus
|
D
|
Turkey
Coronavirus
|
|
P3
|
ssRNA+
|
Coronaviridae
|
Torovirus
|
Equine
Torovirus
|
C
|
Bovine
Torovirus & Porcine Torovirus
|
|
P4
|
dsRNA
|
Reoviridae
|
Coltivirus
|
Colorado
Tick Fever Virus
|
D
|
Eyach
Virus
|
|
P4
|
dsRNA
|
Reoviridae
|
Orbivirus
|
Great
Island Virus
(Kemerovo)
|
A
|
Bluetongue
Virus
|
|
P4
|
dsRNA
|
Reoviridae
|
Orthoreovirus
|
Mammalian
Orthoreovirus
(serotype
3)
|
D
|
Other
serotype
|
|
P4
|
dsRNA
|
Reoviridae
|
Orthoreovirus
|
Nelson
Bay Orthoreovirus
|
A
|
_
|
|
P4
|
dsRNA
|
Reoviridae
|
Orthoreovirus
|
Avian
Orthoreovirus
|
A
|
_
|
|
P4
|
dsRNA
|
Reoviridae
|
Orthoreovirus
|
Baboon
Orthoreovirus
|
A
|
_
|
|
P4
|
dsRNA
|
Reoviridae
|
Orthoreovirus
|
Ophidian
Orthoreovirus
|
A
|
_
|
|
P4
|
dsRNA
|
Reoviridae
|
Seadornavirus
|
Liao
Ning Virus
|
A
|
_
|
|
P4
|
dsRNA
|
Reoviridae
|
Seadornavirus
|
Banna
Virus (BAV-Ch)
|
D
|
Kadipiro
Virus
|
|
P4
|
dsRNA
|
Reoviridae
|
Rotavirus
|
Rotavirus
A
|
D
|
Rotavirus
B
|
|
P4
|
dsRNA
|
Birnaviridae
|
Birnavirus
|
Avian
Birnavirus
|
D
|
_
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Old world)
|
Lymphocytic
Choriomeningitis
Virus
(Armstrong)
|
D
|
Other
isolate
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Old world)
|
Lassa
Virus (Josiah)
|
D
|
Other
isolate
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Old world)
|
Mobala
Virus
|
A
|
Mopeia
Virus
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Old world)
|
Mopeia
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Old world)
|
Ippy
Virus
|
A
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade A)
|
Pichinde
Virus
|
D
|
Other
clade A
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade A)
|
Allpahuayo
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade A)
|
Parana
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade A)
|
Pirital
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade A)
|
Flexal
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade B)
|
Guanarito
Virus
|
D
|
Other
clade B
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade B)
|
Junin
Virus
|
D
|
Other
clade B
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade B)
|
Machupo
Virus
|
D
|
Other
clade B
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade B)
|
Sabia
Virus
|
D
|
Other
clade B
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade B)
|
Cupixi
Virus
|
C
|
Amapari
Virus
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade B)
|
Amapari
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade C)
|
Oliveros
Virus
|
C
|
Latino
Virus
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Clade C)
|
Latino
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Rec)
|
White
Water Arroyo Virus
|
C
|
Other
recombinant
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Rec)
|
Tamiami
Virus
|
C
|
|
|
P4
|
ssRNA-
|
Arenaviridae
|
Arenavirus
(Rec)
|
Bear
Canyon Virus
|
C
|
|
|
P4
|
ssRNA-
|
Bunyaviridae
|
Hantavirus
|
Sin
Nombre Virus
|
D
|
New
York & Andes Virus
|
|
P4
|
ssRNA-
|
Paramyxoviridae
|
Metapneumovirus
|
Human
Metapneumovirus
|
D
|
Other
isolate
|
|
P4
|
ssRNA-
|
Paramyxoviridae
|
Morbillivirus
|
Measles
Virus
|
D
|
Other
isolate
|
|
P4
|
ssRNA-
|
Paramyxoviridae
|
Pneumovirus
|
Human
Respiratory Syncytial Virus
Bovine
?
|
D
|
Other
isolate
|
|
P4
|
ssRNA-
|
Paramyxoviridae
|
Respirovirus
|
Sendai
Virus
|
D
|
Human
Parainfluenza 3 Virus
|
|
P4
|
ssRNA-
|
Paramyxoviridae
|
Rubulavirus
|
Mumps
Virus
|
D
|
Other
isolate
|
|
P4
|
ssRNA-
|
Bornaviridae
|
Bornavirus
|
Borna
Disease Virus
|
D
|
Other
isolate
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Tick-borne
Encephalitis Virus
(European
subtype)
|
D
|
Louping
ill Virus (British subtype)
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Gadgets
Gully Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Kadam
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Kyasanur
Forest Disease Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Langat
Virus
|
D
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Omsk
Hemorrhagic Fever Virus
|
D
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Powassan
Virus
|
D
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Royal
Farm Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Karshi
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Meaban
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Saumarez
Reef Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Tyuleniy
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Aroa
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Cacipacore
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Koutango
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Japanese
Encephalitis Virus
|
D
|
Other
isolate
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Yaounde
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Kokobera
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Bagaza
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Ilheus
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Israel
Turkey Encephalomyelitis
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Ntaya
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Tembusu
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Zika
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Entebbe
bat Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Yokose
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Apoi
Virus
|
D
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Cowbone
Ridge Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Jutiapa
Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Modoc
Virus
|
D
|
Montana
Myotis Leucoencephalitis Virus
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Sal
Vieja Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
San
Perlita Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Bukalasa
bat Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Dakar
bat Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Carey
Island Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Phnom
Penh bat Virus
|
A
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Rio
Bravo Virus
|
D
|
_
|
|
P4
|
ssRNA+
|
Flaviviridae
|
Flavivirus
|
Tamana
bat Virus
|
VIZIER viruses list
